Update all versions, specifically file which fixes some bugs that caused tests to fail if run in different orders:

- systemTemp directories created by MemoryFileSystem will allot names based on the file system instance instead of globally.
- MemoryFile.readAsLines()/readAsLinesSync() no longer treat a final newline in the file as the start of a new, empty line.
- RecordingFile.readAsLine()/readAsLinesSync() now always record a final newline.

Fixes #59718

Update all versions, specifically dwds which has a hot restart fix

This reverts commit 43e28084.

This reverts commit 2054f37a.

This reverts commit 8adaea90.

* Move embedding and linking Flutter frameworks into the tool

* Unused import

* Migrate

* Rename run, add comments, remove typedef

* Add status log to tell the user what we did

* Remove Podfile migration, create IOSMigration superclass

* word-smiting
Co-Authored-By: Jonah Williams <jonahwilliams@google.com>

* for space
Co-Authored-By: Jonah Williams <jonahwilliams@google.com>
Co-authored-by: Jonah Williams <jonahwilliams@google.com>

* drop unnecessary test deps

* bump to junit 4.13

This reverts commit 04ea3183.

This reverts commit e768c92f.

* Update packages.

* Add many more global analyses.

* Catch trailing spaces and trailing newlines in all text files.
  Before we were only checking newly added files, but that means we
  missed some.

* Port the trailing spaces logic to work on Windows too.

* Correct all the files with trailing spaces and newlines.

* Refactor some of the dev/bots logic into a utils.dart library.
  Notably, the "exit" and "print" shims for testing are now usable
  from test.dart, analyze.dart, and run_command.dart.

* Add an "exitWithError" function that prints the red lines and
  then exits. This is the preferred way to exit from test.dart,
  analyze.dart, and run_command.dart.

* More consistency in the output of analyze.dart.

* Refactor analyze.dart to use the _allFiles file enumerating logic
  more widely.

* Add some double-checking logic to the _allFiles logic to catch
  cases where changes to that logic end up catching fewer files
  than expected (helps prevent future false positives).

* Add a check to prevent new binary files from being added to
  the repository. Grandfather in the binaries that we've already
  added.

* Update all the dependencies (needed because we now import crypto in
  dev/bots/analyze.dart).

* Update project.pbxproj files to say Flutter rather than Chromium

Also, the templates now have an empty organization so that we don't cause people to give their apps a Flutter copyright.

* Update the copyright notice checker to require a standard notice on all files

* Update copyrights on Dart files. (This was a mechanical commit.)

* Fix weird license headers on Dart files that deviate from our conventions; relicense Shrine.

Some were already marked "The Flutter Authors", not clear why. Their
dates have been normalized. Some were missing the blank line after the
license. Some were randomly different in trivial ways for no apparent
reason (e.g. missing the trailing period).

* Clean up the copyrights in non-Dart files. (Manual edits.)

Also, make sure templates don't have copyrights.

* Fix some more ORGANIZATIONNAMEs

Updated flutter/examples to further conform to new embedding: removed references to FlutterApplication, deleted all MainActivity's that were not necessary, removed all direct invocations of GeneratedPluginRegistrant. (#22529) (#44782)

This reverts commit 99cd4403.

This reverts commit 46edc802.

* Fix device lab tests

* Migrate examples to the Android embedding v2 (#43221)

This reverts commit b49ffa81.

* Remove use_modular_headers from Podfiles using libraries

* Remove @imports