Allows users of Fingerprinter to filter the set of paths collected from
the explicitly-specified paths and those collected from depfiles.

In some cases, depfiles are emitted with files that are not present on
the local disk (e.g. the frontend compiler currently emits buildbot
paths for the dart core libraries and dart:ui). These files will not
materially affect whether we need to re-run a build action for which
they are inputs, since they're not present in the filesystem and
therefore cannot change.